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Organizing biological data
ATAC-seq of E9.5 WT and Smyd1-KO mouse hearts
Transcriptome of E9.5 WT and Smyd1-KO mouse hearts
Tnseq to identify catabolism of b-5 linked aromatics by Novosphingobium aromaticivorans
Expression profiling of whole E10.5 embryos expressing 5 copies of Mir483 at the endogenous locus
Next Generation Sequencing and Quantitative Analysis of mRNAs in Caenorhabditis elegans fbxl-5 Mutant Animals
Full inactivation of DYRK1A in heterozygous embryonic forebrain at E15.5
conditional inactivation of DYRK1A in the Dlx5 domain at embryonic forebrain at E15.5
RNA-Seq of in vitro thyroid mouse organoids exposed to a dose range of phthalates for 24 hours. ATAC-Seq of human epithelial thryoid cell line Nthy-ori 3-1 exposed to DEHP or DINP (1 uM) for 5 days
5-Hydroxymethylcytosine signals in serum are a predictor of chemoresistance in high-grade serous ovarian cancer
mRNA transcript levels in E15.5, E17.5 and P1 Crb1KOCrb2ΔRPC against Crb1KO neuroretina, and in E15.5 Crb1KOCrb2ΔRPC against wild type neuroretina
Transcriptome analysis identifies genes dysregulated in Sox7-null embryos at E8.5
RNA-sequencing of ERBB3hi and ERBB3lo breast luminal progenitor cells from n=3 premenopausal BRCA2 mutation carriers and n=5 non-carriers [RNASeq_3_ERBB3]
Transcriptome of E18.5 CHD4-M195I mouse hearts
Type 1 diabetes and diet-induced obesity predispose C57BL/6J mice to PM2.5-induced lung injury: a comparative study
Homo sapiens
single cell RNA-seq of COVID-19 patients (with ARDS, n=8; without ARDS, n=8) and healthy controls (n=5)
ALKBH5-mediated m6A modification of 5-HT3A mRNA in primary sensory neurons promotes neuropathic pain behaviors
Single cell RNA-sequencing (scRNA-seq) of ISL1 knockout (KO) or knockdown and NKX2.5 KO compared to WT in cardiac progenitors (CPs); scRNA-seq of ISL1 KO compared to WT in motor neuron progenitors (MNPs)
Anti-NR2F1 scCUT&Tag on FAC-sorted Isl1MN-GFP rhombomere 4 neurons from wildtype and HCFP1 Fam5snv/snv E10.5 mouse embryos
The transcriptional factor Clr-5 is involved in cellulose degradation through regulation of amino acid metabolism in Neurospora crassa
Combined transcriptome and T cell receptor alpha/beta (TRA/TRB) single cell RNA sequencing of donor-reactive T cells in stable kidney transplant recipients before and 3-5 years post-transplant.
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